rs47060298 SNP Detail

Summary

• ID
  rs47060298
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100095880 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTTTTAAAA TCATAGATGG AACCTTTCCC AAAGATTAAT
  AGTAAAGATG GCTACTTTCC AATTTTTATA AGAAAAAAAA AAGTAGGGGC TGGAGAGGTG
  G
  CTCGGTGGTT AAGAGCACTG ACTGCTCTTC TAGAGGTCCA GAGTTCAAAT CCCAGCAACC
  ACATGTTGGC TCACAACCAT CTGTAATGAG ATCTGATGC                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135538214	ENSMUSSNP1707041	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320848244	CHEV_3_99992487	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47060298					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100095880 () rs orientation: forward

Symbol	Name	Function Class
Gdap2	ganglioside-induced differentiation-associated-protein 2	within coordinates
Rr64421	regulatory region 64421	721 bp proximal
Rr69692	regulatory region 69692	1321 bp proximal
Rr82369	regulatory region 82369	896 bp proximal