rs47062309 SNP Detail

Summary

• ID
  rs47062309
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:99821373 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTTG TTTGGTGGAC TGAACGTTGT
  R
  TGAACAGAAA CTGCCAGAAT ATAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145525761	ENSMUSSNP3454828	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss322348346	CHEV_7_107320676	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47062309					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:99821373 () rs orientation: forward

Symbol	Name	Function Class
Gm34821	predicted gene, 34821	within coordinates
Gm39057	predicted gene, 39057	1010 bp upstream
Tssr68095	transcription start site region 68095	289 bp upstream