rs47065424 SNP Detail

Summary

• ID
  rs47065424
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:86180682 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTCTAAAAG TTTTACATTA TACATTTCAG CCTGTGGTCT
  GTATGAAGCT GTTTTCGGTT AGGTGTGATG CTTGTAAGCA TTTTGTTTGC TTATTGATGT
  G
  TAGTTGCTAC AGCCCATGTG CTGAGAACAC TGTCACCACT AAGGTGCCTT TTACATCTTT
  GTCAAACCTC AGTTGGGATG GTGTGTTTCT AAGTTTTGT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss135445814	ENSMUSSNP6338327	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320829506	CHEV_3_86077297	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs47065424					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86180682 () rs orientation: forward

Symbol	Name	Function Class
Gm26343	predicted gene, 26343	1857 bp downstream
Lrba	LPS-responsive beige-like anchor	within coordinates