rs47067255 SNP Detail

Summary

• ID
  rs47067255
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31399612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCAAACAC TTAGAATACT
  TACGTACTGT TCACCTTAAG AACGGGCTTG GCCATGTTTA CCTCTCGTAG CATACAGGGT
  GTACAGACAA CAGTAAACAA GCACACAGAT TAACACTACA AGTCACTCTA ACATTCACTT
  TCCTCAGCTA CTCGGATTGA AAACTGCTGT TATCAGGTAC TTACTTGGTT GATCTGCATA
  M
  GTTCTTAAAG GAACTGAAGA AACTCCTTGT AGGCCATGAG ATATCCGATT GAAATGGCCT
  TTCTAGAATA GAAAAAAAAA AGACAAAAGA AATTTTCCTG TTAAGTAAAA TATAATTTTT
  AAAACAGGCT GGCAAAATAG CCCGCTGGCT AAAGGCTCCT GCCACCAAGG GTGACTTCCC
  AAGTTTAATC CGTGGGAACT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61589442	NES17532908	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47067255					SNP	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61589442	NES17532908	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31399612 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4532	CpG island 4532	1239 bp proximal
Dld	dihydrolipoamide dehydrogenase	within coordinates
Rr265302	regulatory region 265302	588 bp proximal
Rr403256	regulatory region 403256	1774 bp upstream
Tssr116040	transcription start site region 116040	1755 bp downstream
Tssr116041	transcription start site region 116041	1820 bp downstream