rs47067331 SNP Detail

Summary

• ID
  rs47067331
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:74593310 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             GCGGGTCCGC GACTTATTGG CGGAGCAGCG GTATGCCGGC CGGGTGCTGC
  Y
  ATCGGACCTG GACCTGCTGC TACACATGAA CAACGCGCGC TACCTGCGCG           
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148149563	ENSMUSSNP2725380	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47067331					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:74593310 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7176	CpG island 7176	within coordinates
Rr369952	regulatory region 369952	1895 bp upstream
Rr504332	regulatory region 504332	1481 bp distal
Rr504333	regulatory region 504333	247 bp distal
Rr504334	regulatory region 504334	444 bp distal
Rr504335	regulatory region 504335	216 bp proximal
Them6	thioesterase superfamily member 6	within coordinates
Tssr131582	transcription start site region 131582	227 bp downstream
Tssr131583	transcription start site region 131583	201 bp downstream
Tssr131584	transcription start site region 131584	101 bp upstream
Tssr131585	transcription start site region 131585	230 bp upstream
Tssr131586	transcription start site region 131586	236 bp upstream