rs47067448 SNP Detail

Summary

• ID
  rs47067448
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:91396282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGTGACAG AAGCCAGACT
  CCCAAATACT CCTACTACAA TGTCCACCCT CTCAAGGAAA TTTGTTCAAA TGTGTCTCAC
  AGTCTGTCTT TCTTCTGAGA TCCTGGATCT CACTCCTGGA AAACACTGGA CAGGGGATAG
  AGAATCCTCT CATATGTGGA TTTGCCAGTG ATTCTAATGT TCACTTTCCA AAGTTTGTTA
  Y
  AGATGGTCCT GGTGTAACAG CCCCATAATC CCAGGTACAG GCTGAAGCAT GAAGTTTGGC
  GGTTCAAACC CAGCTTTTGC CCTATAATGA GTTCAGAACA AGCTGGAGCT AATTACCAAA
  GGCCCTGTCT CAAAATTAAA ATGTGAAAGA AGAGCCGTGA GCAAGAAGGC TCACTGTAAG
  CTCTTGCCTA GTGTTTGTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52679881	NES15527334	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47067448					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52679881	NES15527334	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:91396282 () rs orientation: forward

Symbol	Name	Function Class
Gm47381	predicted gene, 47381	1730 bp upstream