rs47067816 SNP Detail

Summary

• ID
  rs47067816
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:32725478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCGCCCCCGC CCCCGCCCCC CGCATTTTGA TATTCTACCC
  AGGCTGGGAG GAGGGCTCTG GGCCACCGAG GGATTGGCTC AGTCCAGCTC ATCGTCCTGC
  Y
  CAGCCGGTAG CCAGGATCAA AAACATTTCC AGGGAAGAGC GGACGTTTCT GGGACGCATT
  ACTCCTGAGA AAAGGTGCCG GACTTGGGAC ACACGGAAGG                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	FVB/NJ	MOLF/EiJ
ss62676836	NES17315341	PERLEGEN	MM_PANEL2	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	FVB/NJ	MOLF/EiJ
rs47067816					SNP	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62676836	NES17315341	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32725478 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cyp4f17	cytochrome P450, family 4, subfamily f, polypeptide 17			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
Rr392523	regulatory region 392523			within coordinates
Rr525769	regulatory region 525769			32 bp distal
Tssr143717	transcription start site region 143717			64 bp downstream
Tssr143718	transcription start site region 143718			31 bp downstream
Tssr143719	transcription start site region 143719			3 bp downstream