rs47081158 SNP Detail

Summary

• ID
  rs47081158
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:57921961 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCCATCTG CCCAGGCCTT
  GTGTGTTAAT GGTGGCTGTT AGCACATTCA AAGATGGGTG TCGGCCGGGC GTGGTGGCGC
  ATGCCTTTTA TCCCAGCACT TGGGAGGTAG AGGCAGGTGG ATTTCTGAGT TGGAGGCCAG
  CCTGGTCTGC AGAGTGAGTT CTAGGACAGC CAGGGCTACA CAGAGAAACC TGGTCTCGAA
  C
  CCCCCCCCCC AAAAAAAAAG AAAAGAAAAA AAATGGGTGT CAGAGTGCAT ATCTTTAACC
  CAGTGGCTTG GTAGGTGCAT GGTTGGTGGG ATTGGCTTGG GATGGGAGTC AGATCCCTTC
  CACTTTTTTT CTTTTTTGAG TCAGGGTTTA GCGCCAGACT TGCTGTGGTA GCTCAAGTTG
  GCCTCAGACT TGTGAGCTTC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss132187056	ENSMUSSNP7086159	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs47081158					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:57921961 () rs orientation: forward

Symbol	Name	Function Class
Gm51897	predicted gene, 51897	within coordinates
Larp1	La ribonucleoprotein 1, translational regulator	within coordinates
Rr386121	regulatory region 386121	348 bp downstream