rs47086845 SNP Detail

Summary

• ID
  rs47086845
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:161818693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCGTTTTTTA AAAAGGATTC TTGTATAATC ATTTATATAT
  AAACCATAGA AATCATGTGC TAGCATACAT TTAACTTTTT TCCAGCCAAA ATAATAGTCA
  T
  AATAACTAAA CGGAGTTAGT TACCCATGCT GTCCAATCAA CTGGAAAATT AAACACTTGC
  AGTGTCAGCC TTCCTTCATC ATAGCTCACA AAGAGGTAA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145926583	ENSMUSSNP4068118	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47086845					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161818693 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnm3	dynamin 3			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
				Noncoding-Transcript-Variant
Gm38304	predicted gene, 38304			within coordinates
Rr372345	regulatory region 372345			within coordinates
Rr421884	regulatory region 421884			143 bp distal