rs47087464 SNP Detail

Summary

• ID
  rs47087464
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:4694299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CACTTTGGGT TTCCAGGGGA CACTTACCAT CTGGTGGTGG
  TGGCTGTAGG GGATGTTGGT CTCCTGGAAA AAGGTGCTGA GGGCTGTCTG CAGAGAGAAA
  G
  GCTGTGCTTA CCCTCCAAGA CCTGTCCAAC CATCCCCGAG GGACAGGGTG AACTGAGGTC
  CAGCAGTGTG TCTGTGACCA TCACACAAGG AGGTCTCATG G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147726245	ENSMUSSNP1827957	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47087464					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:4694299 () rs orientation: forward

Symbol	Name	Function Class
Rr370036	regulatory region 370036	1770 bp upstream
Tssr139803	transcription start site region 139803	682 bp upstream
Tssr139804	transcription start site region 139804	589 bp upstream
Tssr139805	transcription start site region 139805	1875 bp downstream
Tssr139806	transcription start site region 139806	1899 bp downstream
Ubald1	UBA-like domain containing 1	within coordinates