rs47095432 SNP Detail

Summary

• ID
  rs47095432
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:172116827 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGATGACTAC TACCGCAACG TTCAGTTCCC TCAATGCCCT
  TTATATGCGG AGCTTTAGCC AAATAAGTAC AGTTTCAGGA GTCAGCCCCT TCCCTGCACT
  R
  TGCTGGGGTG AGGAGCTTTC TTGGGAGGCT AGCGTCTCAC CTTCCACGCA GTTGGTAGAG
  AAGAAACAGA TATTGCGCGT CTCCAAGGGG TTCTCGTGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss120008639	PARCsnp_1.18398	PARC_SEQ	INBRED	f	SNP		A	G
ss120011725	PARCsnp_1.08130	PARC_SEQ	INBRED	f	SNP		A	G
ss146186724	ENSMUSSNP2121387	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320123905	CHEV_1_174219391	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs47095432					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:172116827 () rs orientation: forward

Symbol	Name	Function Class
Atp1a2	ATPase, Na+/K+ transporting, alpha 2 polypeptide	within coordinates
Gm39704	predicted gene, 39704	within coordinates
Gm57554	predicted gene, 57554	within coordinates
Tssr15205	transcription start site region 15205	127 bp downstream