rs47097421 SNP Detail

Summary

• ID
  rs47097421
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:89620934 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAGTGTGCA GAGGCCTACA CAGCACACCC CCAACTCTGT
  TTCTGAGACT TGCATTTTAC GGAAACTGAG TTCCACACCG TATGTTCTCT CTATTTCTCC
  Y
  GATGGCCTGA GAATGTGCTT GTTTTAGATG TTACACGAGT TCTCCGGTGC CAGGGCCATG
  ATCACAATAA TCCTACGTAG TAAGAAATGA AGGGCACTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147262008	ENSMUSSNP1174984	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47097421					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:89620934 () rs orientation: forward

Symbol	Name	Function Class
Bltp3b	bridge-like lipid transfer protein family member 3B	within coordinates
Tssr95182	transcription start site region 95182	765 bp upstream