rs47098123 SNP Detail

Summary

• ID
  rs47098123
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52249145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGTT AGAATAGAAC TAAGGAGTAG
  C
  GGCTACTGCA AGCCTAGGCC TTACA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss139499022	ENSMUSSNP1725668	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss324626578	CHEV_14_52631363	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47098123					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52249145 () rs orientation: forward

Symbol	Name	Function Class
D14Mit183	DNA segment, Chr 14, Massachusetts Institute of Technology 183	1319 bp distal
Tssr128473	transcription start site region 128473	825 bp upstream
Tssr128474	transcription start site region 128474	783 bp upstream
Zfp219	zinc finger protein 219	within coordinates