rs47104453 SNP Detail

Summary

• ID
  rs47104453
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:31560720 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ACGAGTTAAC TTAATATTGC CAATACTCAA CATGGCTGCC
  ACACTATCCA TTCCCATTGG TCGCTTCTCT GAAGGAAGGC GGGAGTTGAG GAGCGGTGTA
  R
  AGCTGCGCCT GCGCAAGTCA TTGGCGCCAA GATGGCGTTG GAGATGAGGC TCCCTAAAGC
  TCGCAAACCT CTCAGTGAGA GCTTGGGCCG CGACTCTAAG A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146403689	ENSMUSSNP119498	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47104453					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:31560720 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11482	CpG island 11482	within coordinates
Exosc2	exosome component 2	7 bp upstream
Rr396882	regulatory region 396882	within coordinates
Rr554683	regulatory region 554683	within coordinates
Tssr17210	transcription start site region 17210	6 bp upstream