rs47105318 SNP Detail

Summary

• ID
  rs47105318
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78431073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTTATCTT CCTCATCAGA
  CCCCACCACT TAGTTGCATT TTTAGGGGTG TACCCCTCAC CCATTCCTTT TAGGTAGTGC
  CGACATGCCC TGTTCCCTTA TTGGGAAGGG ATCTTTTAGC TGAGTGGGGA GTCTCTGTTT
  CCTTTGCTCC TCACATTCGC CTAAACCCAA GCTCATCAGC AGTTCCTCTG CTCCTCCTAG
  Y
  CAGTCAGCCT ACTAACACTA ACATGTAGTT TCCTTTACCA GCTTCTCAGG TGGACCCCCA
  AGTCTGGGAC GTCCAGAACC CTCTGTTGCT AAACACCATT CTCCTGTTGT CATCCAGTTC
  CTGGACTCTA CCAGGTACAT CACCCAAGCT CAATGCCCTC TCTCTCTCCA GAGCCTCAGG
  GGACTTAAGC CCATCATTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss136668128	ENSMUSSNP5206311	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47105318					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78431073 () rs orientation: forward

Symbol	Name	Function Class
Gm47430	predicted gene, 47430	1634 bp downstream
Gm69163	predicted gene, 69163	1228 bp upstream
Rr206776	regulatory region 206776	1672 bp distal
Rr383643	regulatory region 383643	652 bp upstream