rs47105407 SNP Detail

Summary

• ID
  rs47105407
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:52740927 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCAGCTAC AAGAAACTTC
  ACTAAACAAT TAAACATCAG CTGACCCCCT TCAGTGTACC AGTCACTGCA ATGAGAAACT
  GCCATGTTCC ATCTAGCTTT CATAAACCAC TCTCAATAGA CAGGCACTAA CTTCATGCCC
  ATGAGCAGCA GAGGACATAA CAGACACAAA CGCTGTCTAA CTTGCCAAAA ACTGTCAAGC
  G
  GCAGCTTTGG GTTGAGTTGG ACAACCTAGT TCAGCTTGTG CTAGCATAAA CACAATGAAA
  CTAGTGGCCT GGTTTATGAA ACAGCCTTTC ATAAACCAGG CCCCTGGCTC TTACAATGAT
  ACTGGAGGAT GCTTGTAGGT CAACTCCTTC TGAATCCAGA TGTGGAAAAC AAGCTACATA
  AAGTCCATAG CACATCCCTA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss149119698	ENSMUSSNP3469243	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47105407					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:52740927 () rs orientation: forward

Symbol	Name	Function Class
Gm29670	predicted gene 29670	504 bp downstream
Mfsd6	major facilitator superfamily domain containing 6	within coordinates