rs47107599 SNP Detail

Summary

• ID
  rs47107599
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68260270 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGCTAGAT CCTTGGACTT
  CCATTTACAG CTACTACTGA ACCATTGTTG GGGATTGGAC TGCAGACTGA AAGTCATCAA
  TAAATTCCTT TAATATATAG AGACTATCCA TAAGTTCTGT GACTCTAGAG AACCCTAAAT
  AATATAATAC ATAACCTCAT TTCTAAAAAA AAAAAAAATT GCTCTAAGCT GAACAGTCCA
  G
  GCGAGCTAAA AATTTCAAGC CTTTTTCTGA GAGTTCTTTT CCTGAATGTT CTCTAAGTGT
  ATAAACATAT GTTAGAGCAC TTGTTTGTTT ATTCACTTGC CGCTCTATTT TTGTTGTTAC
  TGAGGCTACA GAGCTAATTA CTCAGAGCTA AACAAAAAAT AGTAATAAGG TTTTCTTTTT
  CCAATTTTTT TTTCAACTCC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146487541	ENSMUSSNP4119166	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47107599					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68260270 () rs orientation: forward

Symbol	Name	Function Class
Rr376643	regulatory region 376643	139 bp downstream
Rr376644	regulatory region 376644	1002 bp upstream