rs47111480 SNP Detail

Summary

• ID
  rs47111480
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31060607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATATCTAT TATAATGTGT
  GATCTATAGC ATAAGCAAGG TCTGCAAGGG CAGAGCACAT ATGGTCAGAG TCCTGTCTCT
  TACAATGGAT CATCTCTTCC CGTGCTTGCT TGCCTACAAC CTTATAGCCA TGAGTCCCTC
  ATGGTCATGT ACCCCTCAGC ACCATGTGAG GTCCCCGATC CCACAAAGGC ACAGAAACAC
  Y
  CACCAATCCT TAGCTCTCCA TGTAGCCACC TTCCAGATGA AGTTTATCTT TGGAGAACCC
  TCCGCTAAAA AGGATCACCC CTTTCCAACT GCCAACTCAG TTAGCCACAG CTGAGTCGCT
  CCACTGCAAG GTGTCACCTT TGCCGTCCAT ACCTAGCTAG GAGGAGGGGC ATGTCTGTCT
  CTCTCCCAGC CCTTCAGCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ
ss60563498	NES16496111	PERLEGEN	MM_PANEL2	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ
rs47111480					SNP	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60563498	NES16496111	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31060607 () rs orientation: forward

Symbol	Name	Function Class
Dnah8	dynein, axonemal, heavy chain 8	within coordinates
Gm50252	predicted gene, 50252	within coordinates
Rr330577	regulatory region 330577	207 bp distal
Rr334763	regulatory region 334763	7 bp distal
Rr341194	regulatory region 341194	194 bp proximal
Rr341195	regulatory region 341195	594 bp proximal