rs47119264 SNP Detail

Summary

• ID
  rs47119264
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106107413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTATAGCCT TTTCTTTGTC ATCAATCAAG CAGATTAAAG
  GTGTTGATGA CTGACAGAGG TGTCTGACAA GCTTTTGGTT TTCTTTATTG TTATCAGAAG
  A
  TGACATGAGG ACCACAATGA TAGAAGAGAC ATGTTGGAGG AAGCTGAGTT GTTGGGTATG
  TTCCTTGGCA TCTCCATGAA GATTGGTGAA CATCAGACA                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss145614944	ENSMUSSNP7041312	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs47119264					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106107413 () rs orientation: forward

Symbol	Name	Function Class
Gm72977	predicted gene, 72977	within coordinates
Gvin-ps7	GTPase, very large interferon inducible, pseudogene 7	within coordinates
Tssr74134	transcription start site region 74134	1903 bp upstream
Tssr74135	transcription start site region 74135	1823 bp upstream
Tssr74136	transcription start site region 74136	1777 bp upstream
Tssr74137	transcription start site region 74137	1711 bp upstream
Tssr74138	transcription start site region 74138	1673 bp upstream
Tssr74139	transcription start site region 74139	1631 bp upstream
Tssr74140	transcription start site region 74140	1578 bp upstream
Tssr74141	transcription start site region 74141	1188 bp upstream
Tssr74142	transcription start site region 74142	1034 bp upstream
Tssr74143	transcription start site region 74143	1005 bp downstream
Tssr74144	transcription start site region 74144	1195 bp downstream
Tssr74145	transcription start site region 74145	1300 bp downstream
Tssr74146	transcription start site region 74146	1848 bp downstream
Tssr74147	transcription start site region 74147	1916 bp downstream