rs47125202 SNP Detail

Summary

• ID
  rs47125202
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:126650922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCCT GCACCCCCTC AAACAATCAG
  Y
  ATCCTGACTA TTATGAGTTT GTTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147411294	ENSMUSSNP2427794	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47125202					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:126650922 () rs orientation: forward

Symbol	Name	Function Class
AU040320	expressed sequence AU040320	within coordinates
Rr599757	regulatory region 599757	1668 bp distal
Tssr39020	transcription start site region 39020	549 bp downstream
Tssr39021	transcription start site region 39021	125 bp downstream
Tssr39022	transcription start site region 39022	116 bp downstream