rs47127199 SNP Detail

Summary

• ID
  rs47127199
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:61294028 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TTGTGATTTT AATCCGTCAA TCAATCAATT GCTGAAAGTC
  GATCACATGG GTGAGGTGCC AGGAAGGGGA GCGATTAGGC TTTTTAGGCG TGTTTCGTGT
  R
  TTCTATGGCA GCCGTGCATG CGACTCGGTT TCCTTGCACC CTGCTTTGTT TTTTCTTCCT
  GCTGGAGGTC TGGCACCCCA GGAACTCCTT CCGCCGTCCT G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss139609635	ENSMUSSNP3675805	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs47127199					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:61294028 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6575	CpG island 6575	within coordinates
Rr369842	regulatory region 369842	4 bp upstream