rs47132860 SNP Detail

Summary

• ID
  rs47132860
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84413918 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTCTGAAGG CTGTCTGATG GGGGACTTCT CCCATCTGGG
  GTTAACCTTC TCTTCTAGCC AGTCCTCCCA CTTACTAGGT AAGCCCCACC TACACTCTGC
  M
  GAGTAATCTG CTTGGGAAGG CTTAAATGTT AATCCTATTA AAAACACCTT TATAGAAACG
  GCCAAGATAT TTGACCGAAT ATCTGGGTAC CCGGTGTCC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss146130443	ENSMUSSNP7163752	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47132860					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84413918 () rs orientation: forward

Symbol	Name	Function Class
Rr531986	regulatory region 531986	1833 bp distal
Tssr146028	transcription start site region 146028	1692 bp upstream
Tssr149629	transcription start site region 149629	64 bp upstream