rs47135503 SNP Detail

Summary

• ID
  rs47135503
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:18268532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATCA CAAACAGGAC CAAACAAAAC
  R
  CAAAGGTCAA GTTATTTCCT CACCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61577638	NES17527758	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	G	G	G	G
ss137223886	ENSMUSSNP6415704	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47135503					SNP	A	A	A	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61577638	NES17527758	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:18268532 () rs orientation: forward

Symbol	Name	Function Class
Bnip3l-ps	BCL2/adenovirus E1B interacting protein 3-like, pseudogene	1277 bp downstream
Gm40879	predicted gene, 40879	1398 bp upstream
Gm58964	predicted gene, 58964	858 bp downstream
Tssr112909	transcription start site region 112909	1313 bp downstream