rs47137946 SNP Detail

Summary

• ID
  rs47137946
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:34261772 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATTAACTAA AACCCAATTG GCTGGGTACA CCTATGAGGG
  ACTTTTTTTT TCTTAATTAA ATAATTTGAA GTGAGAAAAC CTCCTTTTAA TCCCAGTCTT
  W
  TGTGGTGGGA AGATAGACCT TTAATCCAGA TCTTTGGAGG AGAGAAAATC TACTTGGCCA
  CACACCTTCT GGTGGCAGCC TATATAAAGA ACACAAAAG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148216933	ENSMUSSNP1046876	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47137946					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:34261772 () rs orientation: forward

Symbol	Name	Function Class
Poln	DNA polymerase N	within coordinates
Tssr50627	transcription start site region 50627	1353 bp downstream
Tssr50628	transcription start site region 50628	1376 bp downstream