rs47145747 SNP Detail

Summary

• ID
  rs47145747
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56901614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCAATAAA TACCCTTCTG
  CATGGCTGTT GGAGGTTCAG TCCGTCAGAG GCTGGACCTC TCGGATGCCT GCAAGGCTGT
  GGTTCATCCT GCAGTCACCC TTTTTCTTTG ATCATCCTTG TGACCGAGAT ACCAACACAA
  GGGGCAGAGC CATCAGCGCA GAGGTGCTGC AGAAATGAGG CTTGGGCTCC TCCCTGCCTG
  R
  AGATTTGGAT ATGGATGAAT GGAAGAATTG CACAGGCAGT AAGATAGCTC GGTAAGTAGA
  CACTTAGCAA GAAAGCCTGT AGACTTGTGT TTCTCTCCAG AACCCACATG AGGATGGAAT
  GAAGAAGTGG CTCCACAAAG CTGTCTTGTG GCCTCACACA TATTATGGAC ACACCCACAA
  TAATAATATT TACTACTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52725533	NES15565092	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47145747					SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52725533	NES15565092	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56901614 () rs orientation: forward

Symbol	Name	Function Class
Btf3-ps18	basic transcription factor 3, pseudogene 18	1564 bp downstream
Gm62612	predicted gene, 62612	1293 bp downstream