rs47146934 SNP Detail

Summary

• ID
  rs47146934
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:100005810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCATTCTG TCTCTTACAA
  CTGACAACTT CATTGCAATC ACCATTAAGT CTAAACATGC ATCCTCACAT ATATACAGCT
  GTCCTGGGGC CACTGATCAT ATATTGCTTC TCCTATGAAA TAAGCACGAG TTACGGCACA
  CCCACCACCA AGCTGAGTTC CTGTCAGTGA TTATCCCATG AAACTTTTTT TTTTTTTTTT
  Y
  GAGAAAGGTC TCACTGTGCC AGGTTGGCCT GGAACTCAGA GAGATCTACC CACCTCTGCC
  TCCCAAGTGC TAAGATTAAA GGTGTGCACC ACCATGCCGG GTGCAAGAGA ACATTATTAA
  ATCTGATATT TCAGGATGCA ATCATGATGG AAGAATTTGC TAACACCGGC TGGAGAAGCC
  CTGAACACAG TCTGTGTGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss145079705	ENSMUSSNP3767441	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss324505373	CHEV_13_100639257	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs47146934					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:100005810 () rs orientation: forward

Symbol	Name	Function Class
Rr269933	regulatory region 269933	410 bp distal