rs47147419 SNP Detail

Summary

• ID
  rs47147419
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:74803268 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACAGACACT CCTCAACTGC AGGGCAGCTG CCAGCTACTG
  GAGGGCCTGG TCAGAGAACT TGAGAAGGGA AGCCCTAAGG GGCTGGAGCA GGTCTTTGGA
  M
  CTGACCATCA GGGAGCCCTA CCTGTGTCAC TCTGGACCAT AAGGGTGGAG CCTCTGAAAC
  AAGTGAGTGC CTGGACTGCA AGACCAGGAG TTGGTCCTG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325896883	CHEV_X_73005001	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47147419					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:74803268 () rs orientation: forward

Symbol	Name	Function Class
4933407K13Rik	RIKEN cDNA 4933407K13 gene	within coordinates
Gm61855	predicted gene, 61855	398 bp upstream
Rr4698	regulatory region 4698	868 bp distal
Rr4699	regulatory region 4699	268 bp distal
Rr8776	regulatory region 8776	1467 bp distal
Rr8777	regulatory region 8777	467 bp distal