rs47147747 SNP Detail

Summary

• ID
  rs47147747
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127654244 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGACCAGCT TAGACATCCA
  GCCTCATAGA CTGAATAACC GCTAGATTCT CGGACTTTCT GTTAGGATAT GGCCAGTGCT
  GGACTAGCCT AAGCATAGCC TGTAAGCCAC TCTACTAAAT CCCAAGTATG TGAGAACCCT
  GACTTATGCA GGTAGTATTT CACATTTAAA CTACAATACC TTCAGGATAT GTACTCACTC
  S
  TGAGCTTATT TCTATATTCA TTATCTCTAT CTACATTAAA CTATAGGTCA GTTGATGGTC
  ATGTCCTTTG CTTGATTCAA AGGCAACAGT GGCAGCAGAT GGTGTCTCAC AGTCAATTCT
  ATCTCAGTCT TGCTATGACT GTACGTTCCA ACTACTCCAG GAGCAACTTC TTAAGTCTTT
  TCTTTAGGCC ACCTCTAAAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss135873365	ENSMUSSNP3594777	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320957588	CHEV_3_127563513	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs47147747					SNP	G	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127654244 () rs orientation: forward

Symbol	Name	Function Class
Gm35585	predicted gene, 35585	within coordinates
Rr584887	regulatory region 584887	803 bp proximal
Rr584888	regulatory region 584888	1918 bp proximal
Tssr31614	transcription start site region 31614	990 bp upstream