rs47148230 SNP Detail

Summary

• ID
  rs47148230
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:74592257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATATATAT ATATATATAT
  ATATAATGTT ATTGTATGTA TTTTTCTGCT GATAAACATT TGGCTGTTTA CAGATTTTGT
  TATTATGAAT AAAATTGCAC CCAGTGTTCG TGTACAAATG CTTTCATAAG ATTTGAGCTC
  CCCGGAAAGG AACTGATGGC TCTTAAGATA GCTAAATAAA CACAGTGACA ATGACAGTAG
  K
  TAGGCCACTT TATACCTCTT CCAGGATTAC ATAGCAGACC TAGTTCTGAG CTTCTTTCAA
  ATCCCTGGTC TTCTCATCTT CTCAGGCTTC TTAAAATTCC AGCCTTTCTA TTGGTTAAGA
  GAATTTCATT GTAATACATA GGATTACTTT CGGTTTTGAT TTTTTTTTTC TCCTACAGGT
  ACTGGCCAGC CTGTATCTTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	FVB/NJ
ss52506934	NES15580658	PERLEGEN	MM_PANEL2	f	SNP	G		T		T
ss139742236	ENSMUSSNP5932077	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	FVB/NJ
rs47148230					SNP	G	G	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52506934	NES15580658	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:74592257 () rs orientation: forward

Symbol	Name	Function Class
4933402J15Rik	RIKEN cDNA 4933402J15 gene	710 bp upstream
Gm49171	predicted gene, 49171	within coordinates