rs47150074 SNP Detail

Summary

• ID
  rs47150074
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:116743199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAGTAGTC GATTCTGTAC
  AATTTCCTGG AAGACTGGAA TCAAAATGAA CTAACCTTTC AATGTTAGGT GAAAGGCCAT
  CCGAAGCTGA GATTTTCTAT GTGGGATTTT TTATAAAAGT ATAATGTATA ATAACAGAGA
  TAGGATTATT TAACATTGTG TGTTTTATTT TAAGTACACA CATTTCCTTC AAGGGCTTTG
  R
  CACTTTAACT TATCAATATA TTAAGTTTTT CATAACATTG TCTTATTTTC CTTTGGACAT
  CTGTAGAATC TGCAGGGCTG CCAGCATCCC TCTTCTGTTA GCAGCTGGGC CACTCTTCCC
  TCCCATCCTT TCCCTTTCTC TTCTTGCTCC TCCCTCTCCT CCAACAATCT GACCACTGGG
  CTATCAGGGT TTGTTGTTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133579181	ENSMUSSNP3663462	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47150074					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:116743199 () rs orientation: forward

Symbol	Name	Function Class
Gm22882	predicted gene, 22882	586 bp upstream
Rr637250	regulatory region 637250	1527 bp proximal
Rr637251	regulatory region 637251	1652 bp proximal