rs47150777 SNP Detail

Summary

• ID
  rs47150777
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:110357843 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGCATCT TTACATCATT
  ATTATGATCC AGGAGGTCTG CCTGGCACCA GGAATTCTAG ACGGATGTGG CTCCTTTTAG
  TGAAGGAACC AGGTTATTAA AACATATAGT GATGAATGGG ACAGTAGAGA TCTAGAAAAC
  AAACATCCAA CAGAGATGGA AGGGGGTGGG AGAAGGATTC TTGCTAAACT GAGAACAGCC
  K
  GCTGAGAAGT CATCCAAGAA AAAAAGAGCA AGAGGAAGAA AAACAGAAAT GGCAAGAAGT
  GAGGGTTGGA TTGAGAAGGG CCTCTGACCT CTCCACTAAG TGAGAGTCCC CTCTCCTATT
  TCCTTCCTGC CTCCTTCCAA AAAGATACTG CCTTGGAAGA TGAGTTCAAT GACAACAGTT
  GATAACTGTG CCCCATCACA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J
ss61312784	NES16918336	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	T	G	G		G	G
ss323463786	CHEV_10_109959038	CHEVERUD	SCREENING_POP	f	SNP								G			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J
rs47150777					SNP	G	G	G	G	T	G	G	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61312784	NES16918336	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:110357843 () rs orientation: forward

Symbol	Name	Function Class
D10Mit150	DNA segment, Chr 10, Massachusetts Institute of Technology 150	1249 bp proximal