rs47155155 SNP Detail

Summary

• ID
  rs47155155
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135766443 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTCCTGGAT ACCTGTCCGT GTCAAGGGCG
  GCCTCGTGCT GCCCATCAGT GTAACTAGCA GTGTGTTGCA TCTCATGGAT GTCTGTAGAT
  GTGTACCTGG GGTCTCAGCC CTCTTCTCTG CATTAGGATA TATGTGGGAA ACTGGAAAAG
  R
  CAAGGGCAGG ACCATCCATA TCCCAGCCTT CTGTACTGGA AATGTGGGTC AGACTACAGG
  GGATGGCTTC AGTGTGGGCA GGAAACAGGA CACAAGAGAA AGACACGAGG GTGGTCCTGT
  CAATCACGTT GCTTCTACCG ATCTTGAGTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145548074	ENSMUSSNP6897039	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss319993851	CHEV_1_137735282	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47155155					SNP	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135766443 () rs orientation: forward

Symbol	Name	Function Class
Rr419295	regulatory region 419295	1973 bp distal
Rr419296	regulatory region 419296	1120 bp distal
Rr419297	regulatory region 419297	within coordinates
Rr419298	regulatory region 419298	1903 bp proximal
Tnnt2	troponin T2, cardiac	within coordinates
Tssr9006	transcription start site region 9006	282 bp downstream
Tssr9007	transcription start site region 9007	202 bp upstream
Tssr9008	transcription start site region 9008	1966 bp upstream