rs47156979 SNP Detail

Summary

• ID
  rs47156979
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:60800853 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCCCATG CAAACATTCA
  TGTGGAAATG GATGATCCCT AGATATTAGC TGGTCCCTGG TTTTCTCCTG TGTAAATACC
  TCAAGGTAAT TGCAGAGAAG GGTCTGTAAT TGAAAGGATT TCTTTTGACA GGGCGGTGGG
  TTCCTTCATG AACCCCTTCA TGCCTCATGG AGGGGCCTGT GAGAGCCATG TGGTGGGAGG
  R
  TCAGTTGGGG CCTTCTCTGT GTGGTGCCTT GCTGCCTGTG AATGGACTCC TGATTGGCAG
  GAGGAGAGGC TAAACCAGAC TGTACAGACC CTGGCCGCAG CACCTCTGCC TAGTGGGGGA
  CTCATGGATT CACACTCATT TTAGCTGTTC ATTGAAAATT TTTCATACTT GGGGAACTGA
  AGGTGGTACA GGGTCCCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss149094365	ENSMUSSNP125378	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47156979					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:60800853 () rs orientation: forward

Symbol	Name	Function Class
Dapk1	death associated protein kinase 1	within coordinates
Rr273140	regulatory region 273140	948 bp proximal
Rr276884	regulatory region 276884	1748 bp proximal
Rr284608	regulatory region 284608	within coordinates