rs47164863 SNP Detail

Summary

• ID
  rs47164863
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124019049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAATAATT TTATTGTGTA
  ACTGCCAAGT TATTAAAGAT TTATTCAAAG GGCAAAATGA GTGCTGTTTT GTGATAAATG
  TGAGTTAATA TTGTATTTCT TTCTAACATT TTAAAACATG CCATTTTGAA CTATTTCATA
  AAAACTAATC AAGCTGTATA AAAAAATGGA TTAAAATATT CCCTTTTTTT AACTATCTTG
  R
  TGGAAAGCCT TTGTTGTTTG TATGTTCTCA TAATAAATAT TCTAACTACT AGTTTTGTGT
  GATATCCCCG AGGAAAACAG TGTGAACGGT GTGACACATG ACAGTAGACT AATTATTTAC
  AGCAGCTTCA AGGGAAGGTA AAGAATGTCA TTTCTACACC TACGAAAAAT GGTGTAAATC
  CATCAGCTTG CTTTACTTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss135782562	ENSMUSSNP3805099	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320926398	CHEV_3_123928318	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs47164863					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124019049 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	779 bp proximal