rs47167009 SNP Detail

Summary

• ID
  rs47167009
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:64835437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTCTATAT TGACATAAAA
  GTTTTCCATT TAGTTACTCT AAACCAAAGT GATACTTTAG CCTCTAAAGT CAAAATATTG
  AAAGATAAAT AATGGAAATT TCCATTAAAG GATAATATAC TGAAACAAGC AGAAATACAA
  TGTAATTTTT CATTCTACCT AGATGAATGA GATCTTTAGA ATAAAATTAA GAGAATCCTA
  R
  ACCTTTTGTG ATGATGACTT TATCAGAAAA TAAAGATGGC ATTGTGGTGA TATTTAAGGC
  ATTATCATAG AAGACTACTT CATTACAAAT ACATATGCCC CTGTGGGCAT TGTTCTTTTA
  GTTGTCCTGG GCAATTGCTC AGCCAGTCTA ATAAATCTGA ACTGCTTTCT AATTTGTGTG
  TAAAGATGAA GTTATTGGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss61635072	NES17583669	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs47167009					SNP	A	A	A	A	A	A	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61635072	NES17583669	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:64835437 () rs orientation: forward

Symbol	Name	Function Class
Dnajb6-ps	DnaJ heat shock protein family (Hsp40) member B6, pseudogene	1662 bp downstream
Gm59451	predicted gene, 59451	within coordinates