rs47169970 SNP Detail

Summary

• ID
  rs47169970
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67146106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTC TGTTAACTTT GAGTCTTCTC
  A
  CACTGACCGC CACCCCAGGA AGAAG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss132326639	ENSMUSSNP3315784	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss323719238	CHEV_11_67068782	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47169970					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67146106 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Tssr3528	transcription start site region 3528	537 bp downstream
Tssr3529	transcription start site region 3529	481 bp downstream
Tssr102201	transcription start site region 102201	1762 bp downstream
Tssr102202	transcription start site region 102202	1273 bp downstream
Tssr102203	transcription start site region 102203	1210 bp downstream
Tssr102204	transcription start site region 102204	814 bp downstream
Tssr102205	transcription start site region 102205	597 bp downstream
Tssr102206	transcription start site region 102206	493 bp downstream
Tssr102207	transcription start site region 102207	141 bp upstream
Tssr102208	transcription start site region 102208	311 bp upstream
Tssr102209	transcription start site region 102209	346 bp upstream
Tssr102210	transcription start site region 102210	364 bp upstream
Tssr102211	transcription start site region 102211	374 bp upstream
Tssr102212	transcription start site region 102212	396 bp upstream
Tssr102213	transcription start site region 102213	548 bp upstream
Tssr102214	transcription start site region 102214	904 bp upstream
Tssr102215	transcription start site region 102215	918 bp upstream
Tssr102216	transcription start site region 102216	962 bp upstream
Tssr102217	transcription start site region 102217	1116 bp upstream
Tssr102218	transcription start site region 102218	1827 bp upstream
Tssr102219	transcription start site region 102219	1914 bp upstream
Tssr102220	transcription start site region 102220	1953 bp upstream
Tssr108536	transcription start site region 108536	1226 bp upstream
Tssr108537	transcription start site region 108537	1205 bp upstream
Tssr108538	transcription start site region 108538	695 bp upstream
Tssr108539	transcription start site region 108539	497 bp upstream
Tssr108540	transcription start site region 108540	439 bp upstream
Tssr108541	transcription start site region 108541	155 bp downstream
Tssr108542	transcription start site region 108542	316 bp downstream
Tssr108543	transcription start site region 108543	431 bp downstream
Tssr108544	transcription start site region 108544	1014 bp downstream
Tssr108545	transcription start site region 108545	1946 bp downstream