rs47170175 SNP Detail

Summary

• ID
  rs47170175
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:20413783 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGACA AACAGACAAA CAGGCAGGCA
  Y
  AAGGAAAGCT GGGATCAGGT AATCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146173083	ENSMUSSNP1931785	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47170175					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:20413783 () rs orientation: forward

Symbol	Name	Function Class
D19Mit23	DNA segment, Chr 19, Massachusetts Institute of Technology 23	330 bp distal
Gm32689	predicted gene, 32689	1164 bp upstream
Gm41816	predicted gene, 41816	1335 bp upstream