rs47171613 SNP Detail

Summary

• ID
  rs47171613
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:34514131 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TAGAAGGAGT CATTCAAAGT CTCCTAACCA AAAAATAGCT
  CAGGGCCAAA TTATTTTAGC ACAGAATTAC ACCAGACTTC CAAAGAAGAA ATGATATTAA
  Y
  ACTCTTCAAT TATTCCACAA AATAGAAACA GAAGAAATAC TGCAAAATTC ATTTTATGAG
  GCCACAGTCA CTCTGATTCT CAAACCACAC AAAGATTCAA C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139275955	ENSMUSSNP1385950	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47171613					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:34514131 () rs orientation: forward

Symbol	Name	Function Class
Rr389464	regulatory region 389464	1317 bp upstream