rs47174458 SNP Detail

Summary

• ID
  rs47174458
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:111860052 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGCATCTA AAGGAGATAG
  TAAGATTAAA TACACCTTGA ACATTTTGCT CTGAATCATT CCAAGAACTC AGTGTTGCAT
  GCTTGGTGAC TTAGATTTTC AAAGCCAAGC TCTAAAACAC TGTTACATGT GAGCAAACAG
  ACTTGCAGGG ACTCTTTGAG TATATTTGCT TTTACTGTCT AGCATGATTT AGGTAATTTG
  W
  CCTATTCACT TATATGTATA AATAATTTTC TTTAATCACC TACTGTTATT CAGGTTTTGG
  AGATGATGGC ATTACAGTGA AGTGCAAGAT TGTTAGCTGT CAATATTTAT GCAAAATAAA
  AATCATATTC AATGCATTTT AAAGTTTTCT TCATAATTTT ATACCTCTAC TCTTGATATC
  TTTGTCTTTG TTTGATATTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss134277719	ENSMUSSNP6930725	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss325913346	CHEV_X_110063964	CHEVERUD	SCREENING_POP	f	SNP		A	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs47174458					SNP	A	A	T