rs47181409 SNP Detail

Summary

• ID
  rs47181409
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33190154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CAATCCTGGG TCAATCTGTA ATTGAAACCA CACACACTGC
  CCCTCCTCAC TGTCAAATTT ATTAAGCTGA TGTATGTCAG TGTCTCCTCC TAGTCCAGCA
  W
  AGGGCGAATC AAGCAACAGT AGAACCAAGG CCACCTTATC ATTCCATGGC CCAAGGCATT
  GTATCTTTCT TTTTTTTTTT TAAAGATTTA TTTATTTATT A                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137582649	ENSMUSSNP6859279	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47181409					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33190154 () rs orientation: forward

Symbol	Name	Function Class
F730043M19Rik	RIKEN cDNA F730043M19 gene	within coordinates
Gm16267	predicted gene 16267	516 bp downstream
Rr256081	regulatory region 256081	47 bp proximal
Rr256082	regulatory region 256082	1447 bp proximal
Rr260246	regulatory region 260246	554 bp distal
Rr263299	regulatory region 263299	1643 bp proximal