rs47182769 SNP Detail

Summary

• ID
  rs47182769
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152610788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T AGACATAGCT GAACAGGTTA AATGTGCAGG CAGGAAAACT
  TGTTTGTTCA GTGAATTACG AGGGAGTGAT GTTACAGGAC AGAAGAGAAA ATTGTCAAAT
  R
  TGGTTCAGGG GGAAACTGCG AGCTGTACTG CAGTCTCTTC GACAGCAGCA CGGGCGTGGC
  TCTGTGGTGG ATCCTGGATT AGAACTTCAC CGCCACCATC C                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147974154	ENSMUSSNP2153974	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47182769					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152610788 () rs orientation: forward

Symbol	Name	Function Class
Rr567460	regulatory region 567460	1786 bp distal
Rr567462	regulatory region 567462	627 bp distal
Rr567463	regulatory region 567463	738 bp proximal