rs47184679 SNP Detail

Summary

• ID
  rs47184679
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:18092744 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAA GATGAGAACA GTAGTGCATA
  T
  CTATGACGCC AGAGATAGAA ACCAG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145227556	ENSMUSSNP855376	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47184679					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:18092744 () rs orientation: forward

Symbol	Name	Function Class
Gm36907	predicted gene, 36907	1961 bp downstream
Rr340653	regulatory region 340653	368 bp distal
Tssr5021	transcription start site region 5021	1332 bp downstream
Tssr5022	transcription start site region 5022	1309 bp downstream
Tssr5023	transcription start site region 5023	775 bp upstream
Tssr142818	transcription start site region 142818	510 bp downstream
Tssr142819	transcription start site region 142819	1257 bp upstream