rs47187513 SNP Detail

Summary

• ID
  rs47187513
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119229717 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTAC TGGGACCTGA TGCCAATCCT
  K
  AGGATTTGAG TTTGATTCCC AGCTC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss137047097	ENSMUSSNP4692685	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss323219416	CHEV_9_119309769	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47187513					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119229717 () rs orientation: forward

Symbol	Name	Function Class
Acvr2b	activin receptor IIB	1467 bp upstream
Cpgi22474	CpG island 22474	951 bp proximal
Gm53515	predicted gene, 53515	within coordinates
Gm69683	predicted gene, 69683	within coordinates
Rr688480	regulatory region 688480	566 bp proximal
Rr688481	regulatory region 688481	807 bp proximal
Rr688482	regulatory region 688482	1312 bp proximal
Rr688483	regulatory region 688483	1804 bp proximal
Rr688484	regulatory region 688484	1869 bp proximal
Tssr87682	transcription start site region 87682	1430 bp upstream
Tssr87683	transcription start site region 87683	1505 bp upstream
Tssr87684	transcription start site region 87684	1575 bp upstream