rs47201860 SNP Detail

Summary

• ID
  rs47201860
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:114129202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCCT TGCAGCATTG CGTGTTGCAG
  Y
  ACTTGCTCTC CAGCTGCAGA CACTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132856003	ENSMUSSNP1433253	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47201860					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:114129202 () rs orientation: forward

Symbol	Name	Function Class
Gm11690	predicted gene 11690	within coordinates
Rr248569	regulatory region 248569	202 bp distal
Rr248570	regulatory region 248570	within coordinates
Rr369426	regulatory region 369426	47 bp upstream
Tssr111662	transcription start site region 111662	1223 bp upstream
Tssr111663	transcription start site region 111663	1163 bp upstream