rs47204710 SNP Detail

Summary

• ID
  rs47204710
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43087382 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTGGTCCT TCTACCTAGG CTGGGTCTCC TTCATCCTCT
  TCCTCTTTGC AGGTGACTAC TCAGCCCACC TCCCTGGGGG AGGACCACGA TGGGGGCTGG
  Y
  GCAGGGCAGT GCAGGGCACT CAAGTACTTA ATCTCTGCTC CCTGCCCCCC TCCCCCTCCC
  CCGCTTTCTC TCCACACCAG GCTGCCTGAG CCTGGGTGC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss149072711	ENSMUSSNP6082557	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47204710					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43087382 () rs orientation: forward

Symbol	Name	Function Class
Gm52993	predicted gene, 52993	1967 bp downstream
Lim2	lens intrinsic membrane protein 2	1962 bp downstream
Nkg7	natural killer cell group 7 sequence	within coordinates
Tssr2210	transcription start site region 2210	939 bp downstream
Tssr65999	transcription start site region 65999	977 bp downstream
Tssr66000	transcription start site region 66000	784 bp downstream
Tssr66001	transcription start site region 66001	362 bp downstream
Tssr66002	transcription start site region 66002	334 bp downstream