AACCTAAAAA TACAATTTTT TTCTTGTAAA ATGTATAAAT TGGTTTTGAG AAATTAAGTC ATGTATCTAT ATTTTCTATA CATAAGTACA CAGGAAACAT TTTAGAGTTT GTTTCCTGCT CCAAACATGG TCATGTTAAA ACGAGATTTT AACATTGTTC ATTGAATTTA AAAGTGAATT TTCTTCCATT TAGCATTTCT K GCAACTTCAC ACTGAAATGT CTACTTGTTT AGAAAGACAA ATCAATATAT ATATATGTAT GTATGTATGT ATGTATGTAT ATATATATAT TCCAAAACAA ACAAAAAAAC CCCATATGGG ATGAAAATGT CCACCGAAGG AAATTACTAA TACTTGGATG ATAAAGGAAA TAACATAGGT GATTTCATGG CAAAGCATAA K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss60212603 | NES15723114 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | T | G | T | T | T | T | T | G | T |
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs47206353 | SNP | T | T | T | T | T | G | T | T | T | T | T | G | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss60212603 | NES15723114 | PERLEGEN | MM_PANEL | f | SNP | G/T |
Location: Chr16:50362817 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
G730013B05Rik | RIKEN cDNA G730013B05 gene | within coordinates | ||||||
Gm60707 | predicted gene, 60707 | 361 bp downstream | ||||||
Rr318669 | regulatory region 318669 | 184 bp proximal | ||||||
Rr323833 | regulatory region 323833 | 214 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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