rs47213551 SNP Detail

Summary

• ID
  rs47213551
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135757078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCACCTCAA GTGCTGGAAA
  CCTTACCAGA CTCTGTGTAT ATATTCTGTG TAAGTATATG CAGCTGTGCG CACATACAGG
  CTAGAGGTAG CACAGGATGG CCAGCTTGTC GTGGTGTGGG ATGCAAACTC TCATCCTCAT
  GACTGGGGAT CAAGCCCTCT TCGTTGCTGG GCTATCTCTG CACATGCACA GCCCTCCCCC
  Y
  CCCCCCATAC ACCCCGGCCC ACATCTCACA CTCCTATCCC CTGAGCACAC TTGGTTTTCT
  CCCATTGGAT CTCCCATTGG CTCACTGTCT CAGGCTGGAG CTAGAGCACC TTTCAGCTTG
  GGCCCTGTCT GCCTGAGATG AAGTCAAGGG AAGGAAGGGG ACAGAAGATG GAGAGGGAAG
  AGAGAGGAGC CAAGACGCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss144510663	ENSMUSSNP2129462	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs47213551					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135757078 () rs orientation: forward

Symbol	Name	Function Class
Por	cytochrome p450 oxidoreductase	within coordinates
Rr124528	regulatory region 124528	677 bp distal
Tssr49178	transcription start site region 49178	432 bp upstream