rs47215790 SNP Detail

Summary

• ID
  rs47215790
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:75555590 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGACCTCTG GAAGAACAGC
  CAGTGCTCTT AACTGTGGAG CTATCTCTCC AGCCTTTTAA AGACTGTTTA ATGCTGGGCA
  AAGGGGAAAA ATAAAGAGTA GCTTTACTAG GGGCAAGTTA CAAAGTAGGG CTGGACAGAG
  GAAGGCAAAT GGCTTTGGGG ATGAGTGCTG TTACAATAGG AGGAGTGCAA CCCCAGTCCC
  R
  GGCAAGTGGA AACAGAAGCC CAATGTCACC CTCAGCTACA CAGAGGCCAG CTTAGGCTGT
  AGGAAACCTC ATCCCAAACA AACAAATGAA TGGATTAATG TACATACTCA CGTTTTCCTG
  GCAGGGTTTT GAGGGATAAG CTGCCATGGG TCACAGTAGA CAGACTTAGC TCTGTACCAT
  GTATTGGCTA TGTACTTAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss144696844	ENSMUSSNP3646444	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47215790					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:75555590 () rs orientation: forward

Symbol	Name	Function Class
Gm69448	predicted gene, 69448	1059 bp upstream