rs47216254 SNP Detail

Summary

• ID
  rs47216254
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34727470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTAACTAAC CACTGCCACA GTGGTTTACA ATAGAGCCCT
  TGAACGGTCT TCCCGGCCAG CTGAAATGTG CTCTTTGACC AACAGCTCGC TGTTATTCTC
  C
  ATCTCTAGCC TCAGGGAGCC ATGTTCTACC CTTGCTTCTC TGAGCCCAGC TTCCTGAAAT
  TCCACACGTC CTGAGGTCCT GAGATCCTGA GATCCTGAG                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322576443	CHEV_8_35323370	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47216254					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34727470 () rs orientation: forward

Symbol	Name	Function Class
Gm63978	predicted gene, 63978	within coordinates
Gm63981	predicted gene, 63981	within coordinates
Rr661992	regulatory region 661992	1552 bp proximal
Tssr80908	transcription start site region 80908	212 bp downstream