rs47216336 SNP Detail

Summary

• ID
  rs47216336
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:59698551 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGCC ACGTCCTTCT TAGAGGGGCA
  Y
  GCAAGGAGGA GAAATAAGCA CCCTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132241288	ENSMUSSNP3093688	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47216336					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:59698551 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2968	CpG island 2968	1811 bp proximal
Flcn	folliculin	within coordinates
Rr448261	regulatory region 448261	638 bp proximal
Rr448262	regulatory region 448262	799 bp proximal
Rr448263	regulatory region 448263	1853 bp proximal